A Computational Biologist/Bioinformatician

Luo, Mei; Liu, Yuan; Hermida, Leandro C; Gertz, E Michael; Zhang, Zhao; Li, Qiang; Diao, Lixia; Ruppin, Eytan; Han, Leng; , Race is a key determinant of the human intratumor microbiome, Cancer Cell, 2022

Ruan, Hang; Li, Qiang; Liu, Yuan; Liu, Yaoming; Lussier, Charles; Diao, Lixia; Han, Leng; , GPEdit: the genetic and pharmacogenomic landscape of A-to-I RNA editing in cancers, Nucleic Acids Research, 2022

Zhang, Zhao; Luo, Mei; Li, Qiang; Liu, Yuan; Lussier, Charles; Zhang, Jian; Ye, Youqiong; Guo, An-Yuan; Han, Leng; , Genetic, Pharmacogenomic, and Immune Landscapes of Enhancer RNAs Across Human Cancers, Cancer Research, 2022

Poudel, Bikash; Mullins, Joseph; Puri, Krishna D; Leng, Yueqiang; Karmacharya, Anil; Liu, Yuan; Hegstad, Justin; Li, Xuehui; Zhong, Shaobin; , Molecular Mapping of Quantitative Trait Loci for Fusarium Head Blight Resistance in the Brazilian Spring Wheat Cultivar “Surpresa”, Frontiers in plant science, 2022

Liu, Yuan# ; Han, Leng# ; , TRUST4 Interrogates the Immune Receptor Repertoire in Oncology and Immunotherapy, Cancer Immunology Research, 2022

Jing, Ying; Chen, Xue; Li, Kunyan; Liu, Yaoming; Zhang, Zhao; Chen, Yiqing; Liu, Yuan; Wang, Yushu; Lin, Steven H; Diao, Lixia; , Association of antibiotic treatment with immune-related adverse events in patients with cancer receiving immunotherapy, Journal for immunotherapy of cancer, 2022

Talukder, Zahirul I; Underwood, William; Misar, Christopher G; Seiler, Gerald J; Liu, Yuan; Li, Xuehui; Cai, Xiwen; Qi, Lili; , Unraveling the Sclerotinia basal stalk rot resistance derived from wild Helianthus argophyllus using a high-density single nucleotide polymorphism linkage map, Frontiers in Plant Science, 2021

Salsman, Evan; Liu, Yuan; Hosseinirad, Seyed Ali; Kumar, Ajay; Manthey, Frank; Elias, Elias; Li, Xuehui; , Assessment of genetic diversity and agronomic traits of durum wheat germplasm under drought environment of Northern Great Plains, Crop Science, 2021

Liu, Yuan; Yan, Changhui; , Impacts of reference selection on the assembly of suspicious coronavirus genome, Journal of Bioinformatics and Computational Biology, 2021

Jing, Ying^; Liu, Yuan^; Li, Qiang; Ye, Youqiong; Diao, Lixia; Huang, Yun; Zhou, Yubin; Green, Michael R; Mills, Gordon B; Han, Leng; , Expression of chimeric antigen receptor therapy targets detected by single-cell sequencing of normal cells may contribute to off-tumor toxicity, Cancer cell, 2021

Liu, Yuan; Zhang, Qijun; Salsman, Evan; Fiedler, Jason D; Hegstad, Justin B; Liu, Zhaohui; Faris, Justin D; Xu, Steven S; Li, Xuehui; , QTL mapping of resistance to tan spot induced by race 2 of Pyrenophora tritici-repentis in tetraploid wheat, Theoretical and Applied Genetics, 2020

Galagedara, Nelomie; Liu, Yuan; Fiedler, Jason; Shi, Gongjun; Chiao, Shiaoman; Xu, Steven S; Faris, Justin D; Li, Xuehui; Liu, Zhaohui; , Genome-wide association mapping of tan spot resistance in a worldwide collection of durum wheat, Theoretical and Applied Genetics, 2020

Liu, Yuan; Salsman, Evan; Wang, Runhao; Galagedara, Nelomie; Zhang, Qijun; Fiedler, Jason D; Liu, Zhaohui; Xu, Steven; Faris, Justin D; Li, Xuehui; , Meta-QTL analysis of tan spot resistance in wheat, Theoretical and Applied Genetics, 2020

Marais, Gideon Francois; Fiedler, Jason; Tao, Hongbin; Pirseyedi, Seyed; Hegstad, Justin; Ganaparthi, Venkata; Liu, Yuan; Bisek, Bradley; Li, Xuehui; , Homoeology of Thinopyrum distichum Single Chromosome Additions in Triticale and Wheat, Crop Science, 2020

Liu, Yuan; Yan, Changhui; , A Novel Spatial Feature For Predicting Lysine Malonylation Sites Using Machine Learning, IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2020

Liu, Yuan; Salsman, Evan; Fiedler, Jason D; Hegstad, Justin B; Green, Andrew; Mergoum, Mohamed; Zhong, Shaobin; Li, Xuehui; , Genetic mapping and prediction analysis of FHB resistance in a hard red spring wheat breeding population, Frontiers in plant science, 2019

Liu, Yuan; Ma, Yongchao; Salsman, Evan; Manthey, Frank A; Elias, Elias M; Li, Xuehui; Yan, Changhui; , An enrichment method for mapping ambiguous reads to the reference genome for NGS analysis, Journal of Bioinformatics and Computational Biology, 2019

Fiedler, Jason D; Salsman, Evan; Liu, Yuan; Michalak de Jiménez, Monika; Hegstad, Justin B; Chen, Bingcan; Manthey, Frank A; Chao, Shiaoman; Xu, Steven; Elias, Elias M; , Genome‐wide association and prediction of grain and semolina quality traits in durum wheat breeding populations, The plant genome, 2017